A Survey on Computational Methods for Investigation on ncRNA-Disease Association through the Mode of Action Perspective

Dongmin Bang^†, Jeonghyeon Gu^†, Joonhyeong Park, Dabin Jeong, Bonil Koo, Jungseob Yi, Jihye Shin, Inuk Jung, Sun Kim, and Sunho Lee^＊

2022, International Journal of Molecular Science.

Construction of Condition-Specific Gene Regulatory Network using Kernel Canonical Correlation Analysis

Dabin Jeong, Sangsoo Lim, Sangseon Lee, Minsik Oh, Changyun Cho, Hyeju Seong, Woosuk Jung and Sun Kim^＊

2021, Frontiers in Genetics

DRIM: A Web-Based System for Investigating Drug Response at the Molecular Level by Condition-Specific Multi-Omics Data Integration

Minsik Oh, Sungjoon Park, Sangseon Lee, Dohoon Lee, Sangsoo Lim, Dabin Jeong, Kyuri Jo, Inuk Jung and Sun Kim^＊

2020, Frontiers in Genetics

Network Propagation for the Analysis of Multi-omics Data

Minwoo Pak^†, Dabin Jeong^†, Ji Hwan Moon, Hongryul Ann, Benjamin Hur, Sangseon Lee and Sun Kim^＊

2020, Recent Advances in Biological Network Analysis

Impact of mutations in DNA methylation modification genes on genome-wide methylation landscapes and downstream gene activations in pan-cancer

Chai-Jin Lee, Hongryul Ahn, Dabin Jeong, Minwoo Pak, Ji Hwan Moon and Sun Kim^＊

2020, BMC Medical Genomics

PropaNet: Time-Varying Condition-Specific Transcriptional Network Construction by Network Propagation

Hongryul Ahn^† , Kyuri Jo^†, Dabin Jeong, Minwoo Pak, Jihye Hur, Woosuk Jung^＊, and Sun Kim^＊

2019, Frontiers in Plant Science

TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions

Heonjong Han, Jae-Won Cho, Sangyoung Lee, Ayoung Yun, Hyojin Kim, Dasom Bae, Sunmo Yang, Chan Yeong Kim, Muyoung Lee, Eunbeen Kim, Sungho Lee, Byunghee Kang, Dabin Jeong, Yaeji Kim, Hyeon-Nae Jeon, Haein Jung, Sunhwee Nam, Michael Chung, Jong-Hoon Kim and Insuk Lee ^＊

2018, Nucleic Acids Research